ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1qo0A3 - ECOD Domain | ECOD

ECOD/Domains/e1qo0A3

e1qo0A3

UID: 001005410

RepresentativePDB

Range: A:7-121,A:258-379
PDB: 1QO0 chain A(all domains)
UniProt: P27017 (all domains)
Gene: amiC

Molecule: AMIC

3D Structure

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Related Domains

Browse other domains in Peripla_BP_5 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupFlavodoxin-like(2007)

HH-groupClass I glutamine amidotransferase-like(2007.1)

TT-groupPeriplasmic binding protein-like I(2007.1.2)

FFamilyPeripla_BP_5(2007.1.2.12)

Ligands

in contact, ≤ 4 Å

ButyramideBMD
drugDrugBank DB02121

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF13433Peripla_BP_5

Periplasmic binding protein domain

ClanCL0144Periplas_BP

External Links

ECOD PDB View: 1QO0 RCSB PDB: 1QO0 PDBe: 1QO0 UniProt: P27017

Downloads

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