ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e2ynkA1 - ECOD Domain | ECOD

ECOD/Domains/e2ynkA1

e2ynkA1

UID: 001005467

RepresentativePDB

Range: A:24-477
PDB: 2YNK chain A(all domains)
UniProt: Q8GNN6 (all domains)

Molecule: WZI

3D Structure

Loading viewer...

Related Domains

Browse other domains in Caps_assemb_Wzi →

Classification

AArchitecturebeta barrels(a.1)

XX-groupOuter membrane meander beta-barrels(5084)

HH-groupPorins(5084.5)

TT-groupPorin(5084.5.1)

FFamilyCaps_assemb_Wzi(5084.5.1.12)

Ligands

in contact, ≤ 4 Å

DodecaneD12
HexaneHEX
N-octaneOCT

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF14052Caps_assemb_Wzi

Capsule assembly protein Wzi

ClanCL0193MBB

External Links

ECOD PDB View: 2YNK RCSB PDB: 2YNK PDBe: 2YNK UniProt: Q8GNN6

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure