ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3gn6C1 - ECOD Domain | ECOD

ECOD/Domains/e3gn6C1

e3gn6C1

UID: 001005489

RepresentativePDB

Range: C:20-166
PDB: 3GN6 chain C(all domains)
UniProt: Q8KDY2 (all domains)
Gene: CT0912

Molecule: CT0912, ORFan protein with a ferredoxin-like domain repeat

3D Structure

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Related Domains

Browse other domains in ABM-like →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupDimeric alpha+beta barrel(304.4)

TT-groupDimeric alpha+beta barrel(304.4.1)

FFamilyABM-like(304.4.1.26)

Ligands

in contact, ≤ 4 Å

Magnesium ionMG
metalwithin 5 Å only

+ 2 additives (Nonaethylene glycol, Glycerol)

Nonaethylene glycol2PE
GlycerolGOL

Pfam Families

PF21931ABM-like

ABM-like domain

ClanCL0032Dim_A_B_barrel

External Links

ECOD PDB View: 3GN6 RCSB PDB: 3GN6 PDBe: 3GN6 UniProt: Q8KDY2

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.