ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1jxhB1 - ECOD Domain | ECOD

ECOD/Domains/e1jxhB1

e1jxhB1

UID: 000100660

PDB

Range: B:2-266
PDB: 1JXH chain B(all domains)
UniProt: P55882 (all domains)
Gene: thiD

Molecule: PHOSPHOMETHYLPYRIMIDINE KINASE

3D Structure

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Related Domains

Browse other domains in Phos_pyr_kin →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRibokinase-like(2003.6)

TT-groupRibokinase-like(2003.6.1)

FFamilyPhos_pyr_kin(2003.6.1.5)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF08543Phos_pyr_kin

Phosphomethylpyrimidine kinase

ClanCL0118Ribokinase

External Links

ECOD PDB View: 1JXH RCSB PDB: 1JXH PDBe: 1JXH UniProt: P55882

Downloads

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