ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e1xrsB2 - ECOD Domain | ECOD

ECOD/Domains/e1xrsB2

e1xrsB2

UID: 000010078

RepresentativePDB

Range: B:102-261
PDB: 1XRS chain B(all domains)
UniProt: E3PRJ4 (all domains)
Gene: kamE

Molecule: D-lysine 5,6-aminomutase beta subunit

3D Structure

Loading viewer...

Related Domains

Browse other domains in B12-binding →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupFlavodoxin-like(2007)

HH-groupClass I glutamine amidotransferase-like(2007.1)

TT-groupCheY-like(2007.1.3)

FFamilyB12-binding(2007.1.3.4)

Ligands

in contact, ≤ 4 Å

Pyridoxal phosphatePLP
drugDrugBank DB00114
CobalaminB12

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF02310B12-binding

B12 binding domain

External Links

ECOD PDB View: 1XRS RCSB PDB: 1XRS PDBe: 1XRS UniProt: E3PRJ4

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure