ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1ot3D1 - ECOD Domain | ECOD

ECOD/Domains/e1ot3D1

e1ot3D1

UID: 000100795

PDB

Range: D:12-208
PDB: 1OT3 chain D(all domains)
UniProt: Q9XZT6 (all domains)
Gene: dnk

Molecule: Deoxyribonucleoside Kinase

3D Structure

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Related Domains

Browse other domains in dNK →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilydNK(2004.1.1.70)

Ligands

in contact, ≤ 4 Å

ThymidineTHM
drugDrugBank DB04485

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer.

Pfam Families

Deoxynucleoside kinase

ClanCL0023P-loop_NTPase

External Links

ECOD PDB View: 1OT3 RCSB PDB: 1OT3 PDBe: 1OT3 UniProt: Q9XZT6

Downloads

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Drug annotations from DrugDomain.