ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2vp9F1 - ECOD Domain | ECOD

ECOD/Domains/e2vp9F1

e2vp9F1

UID: 000100838

PDB

Range: F:12-208
PDB: 2VP9 chain F(all domains)
UniProt: Q9XZT6 (all domains)
Gene: dnk

Molecule: DEOXYNUCLEOSIDE KINASE

3D Structure

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Related Domains

Browse other domains in dNK →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilydNK(2004.1.1.70)

Ligands

in contact, ≤ 4 Å

2',3'-Dideoxycytidine-5'-MonophosphateDOC
drugDrugBank DB02883

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Pfam Families

Deoxynucleoside kinase

ClanCL0023P-loop_NTPase

External Links

ECOD PDB View: 2VP9 RCSB PDB: 2VP9 PDBe: 2VP9 UniProt: Q9XZT6

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.