ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5ukdA1 - ECOD Domain | ECOD

ECOD/Domains/e5ukdA1

e5ukdA1

UID: 000100876

PDB

Range: A:1-194
PDB: 5UKD chain A(all domains)
UniProt: P20425 (all domains)
Gene: pyrK

Molecule: URIDYLMONOPHOSPHATE/CYTIDYLMONOPHOSPHATE KINASE

3D Structure

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Related Domains

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Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyADK(2004.1.1.41)

Ligands

in contact, ≤ 4 Å

Adenosine disphosphateADP
drugDrugBank DB16833
Cytidine-5'-MonophosphateC5P
drugDrugBank DB03403

Pfam Families

Adenylate kinase

ClanCL0023P-loop_NTPase

External Links

ECOD PDB View: 5UKD RCSB PDB: 5UKD PDBe: 5UKD UniProt: P20425

Downloads

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Aluminum fluoride

Magnesium ionMG

metalwithin 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.