ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1f8yA1 - ECOD Domain | ECOD

ECOD/Domains/e1f8yA1

e1f8yA1

UID: 000010090

RepresentativePDB

Range: A:2-157
PDB: 1F8Y chain A(all domains)
UniProt: Q9R5V5 (all domains)
Gene: ntd

Molecule: NUCLEOSIDE 2-DEOXYRIBOSYLTRANSFERASE

3D Structure

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Related Domains

Browse other domains in Nuc_deoxyrib_tr →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupFlavodoxin-like(2007)

HH-groupN-deoxyribosyltransferase(2007.15)

TT-groupN-deoxyribosyltransferase(2007.15.1)

FFamilyNuc_deoxyrib_tr(2007.15.1.2)

Ligands

in contact, ≤ 4 Å

5-methyl-2'-deoxypseudouridine5MD
drugDrugBank DB03763

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF05014Nuc_deoxyrib_tr

Nucleoside 2-deoxyribosyltransferase

ClanCL0498Nribosyltransf

External Links

ECOD PDB View: 1F8Y RCSB PDB: 1F8Y PDBe: 1F8Y UniProt: Q9R5V5

Downloads

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