ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1p72B1 - ECOD Domain | ECOD

ECOD/Domains/e1p72B1

e1p72B1

UID: 000100918

PDB

Range: B:20-352
PDB: 1P72 chain B(all domains)
UniProt: P24425 (all domains)
Gene: TK

Molecule: Thymidine kinase

3D Structure

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Related Domains

Browse other domains in Herpes_TK →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyHerpes_TK(2004.1.1.52)

Ligands

in contact, ≤ 4 Å

Adenosine disphosphateADP
drugDrugBank DB16833
ThymidineTHM
drugDrugBank DB04485

+ 1 additive (Sulfate ion)

Pfam Families

PF00693Herpes_TK

Thymidine kinase from herpesvirus

ClanCL0023P-loop_NTPase

External Links

ECOD PDB View: 1P72 RCSB PDB: 1P72 PDBe: 1P72 UniProt: P24425

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.