ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1p75D1 - ECOD Domain | ECOD

ECOD/Domains/e1p75D1

e1p75D1

UID: 000100922

PDB

Range: D:20-352
PDB: 1P75 chain D(all domains)
UniProt: P24425 (all domains)
Gene: TK

Molecule: Thymidine kinase

3D Structure

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Related Domains

Browse other domains in Herpes_TK →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyHerpes_TK(2004.1.1.52)

Ligands

in contact, ≤ 4 Å

p1-(5'-adenosyl)p5-(5'-thymidyl)pentaphosphateT5A
drugDrugBank DB03280

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Pfam Families

PF00693Herpes_TK

Thymidine kinase from herpesvirus

ClanCL0023P-loop_NTPase

External Links

ECOD PDB View: 1P75 RCSB PDB: 1P75 PDBe: 1P75 UniProt: P24425

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.