ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4apzl1 - ECOD Domain | ECOD

ECOD/Domains/e4apzl1

e4apzl1

UID: 001012834

PDB

Range: l:1-142
PDB: 4APZ chain l(all domains)
UniProt: O31801 (all domains)
Gene: yncF

Molecule: PROBABLE DEOXYURIDINE 5'-TRIPHOSPHATE NUCLEOTIDOHYDROLASE YNCF

3D Structure

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Related Domains

Browse other domains in dUTPase →

Classification

AArchitecturebeta barrels(a.1)

XX-groupbeta-clip(70)

HH-groupdUTPase-like(70.2)

TT-groupdUTPase-like(70.2.1)

FFamilydUTPase(70.2.1.1)

Ligands

in contact, ≤ 4 Å

2'-DeoxyuridineDUR
drugDrugBank DB02256
Magnesium ionMG
metal
PYROPHOSPHATE 2-

Pfam Families

PF00692dUTPase

dUTPase

ClanCL0153dUTPase

External Links

ECOD PDB View: 4APZ RCSB PDB: 4APZ PDBe: 4APZ UniProt: O31801

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

+ 1 additive (Phosphate ion)

Phosphate ionPO4
DrugBank DB14523

Shown in the structure viewer. Drug annotations from DrugDomain.