ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4ireE1 - ECOD Domain | ECOD

ECOD/Domains/e4ireE1

e4ireE1

UID: 001013127

PDB

Range: E:1-191
PDB: 4IRE chain E(all domains)
UniProt: Q7NDN8 (all domains)
Gene: glvI

Molecule: Proton-gated ion channel

3D Structure

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Related Domains

Browse other domains in Neur_chan_LBD →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupNicotinic receptor ligand binding domain-like(11.12)

TT-groupNicotinic receptor ligand binding domain-like(11.12.1)

FFamilyNeur_chan_LBD(11.12.1.1)

Ligands

in contact, ≤ 4 Å

tetradecyl 4-O-alpha-D-glucopyranosyl-beta-D-glucopyranosideLMD
1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINEPC1

+ 2 additives (Acetate, Oxalate ion)

AcetateACT

Pfam Families

PF02931Neur_chan_LBD

Neurotransmitter-gated ion-channel ligand binding domain

ClanCL0974NLGIC_lig-bind

External Links

ECOD PDB View: 4IRE RCSB PDB: 4IRE PDBe: 4IRE UniProt: Q7NDN8

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB14511

Oxalate ionOXL

Shown in the structure viewer. Drug annotations from DrugDomain.