ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1r8qB1 - ECOD Domain | ECOD

ECOD/Domains/e1r8qB1

e1r8qB1

UID: 000101414

PDB

Range: B:18-177
PDB: 1R8Q chain B(all domains)
UniProt: P84080 (all domains)
Gene: ARF1

Molecule: ADP-ribosylation factor 1

3D Structure

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Related Domains

Browse other domains in Arf →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyArf(2004.1.1.16)

Ligands

in contact, ≤ 4 Å

Brefeldin AAFB
drugDrugBank DB07348
Guanosine-3'-monophosphate-5'-diphosphateG3D
drugDrugBank DB04121

Pfam Families

ADP-ribosylation factor family

ClanCL0023P-loop_NTPase

External Links

ECOD PDB View: 1R8Q RCSB PDB: 1R8Q PDBe: 1R8Q UniProt: P84080

Downloads

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Magnesium ionMG

metal

Shown in the structure viewer. Drug annotations from DrugDomain.