ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2j59E1 - ECOD Domain | ECOD

ECOD/Domains/e2j59E1

e2j59E1

UID: 000101441

PDB

Range: E:18-177
PDB: 2J59 chain E(all domains)
UniProt: P84078 (all domains)
Gene: Arf1

Molecule: ADP-RIBOSYLATION FACTOR 1

3D Structure

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Related Domains

Browse other domains in Arf →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyArf(2004.1.1.16)

Ligands

in contact, ≤ 4 Å

Guanosine-5'-TriphosphateGTP
drugDrugBank DB04137
Magnesium ionMG
metal

+ 2 additives (1,4-Dioxane, 1,2-ETHANEDIOL)

Pfam Families

ADP-ribosylation factor family

ClanCL0023P-loop_NTPase

External Links

ECOD PDB View: 2J59 RCSB PDB: 2J59 PDBe: 2J59 UniProt: P84078

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

1,4-DioxaneDIO

DrugBank DB03316

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.