ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4jzvA1 - ECOD Domain | ECOD

ECOD/Domains/e4jzvA1

e4jzvA1

UID: 001015162

PDB

Range: A:1-158
PDB: 4JZV chain A(all domains)
UniProt: O35013 (all domains)
Gene: ytkD

Molecule: RNA PYROPHOSPHOHYDROLASE

3D Structure

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Related Domains

Browse other domains in NUDIX →

Classification

AArchitecturea+b two layers(a.11)

XX-groupbeta-Grasp(221)

HH-groupNudix(221.4)

TT-groupNudix(221.4.1)

FFamilyNUDIX(221.4.1.1)

Ligands

in contact, ≤ 4 Å

Magnesium ionMG
metal

+ 1 additive (HEPES)

HEPESEPE
DrugBank DB16872

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

NUDIX domain

ClanCL0261NUDIX

External Links

ECOD PDB View: 4JZV RCSB PDB: 4JZV PDBe: 4JZV UniProt: O35013

Downloads

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