ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1tndC2 - ECOD Domain | ECOD

ECOD/Domains/e1tndC2

e1tndC2

UID: 000101532

PDB

Range: C:28-56,C:178-342
PDB: 1TND chain C(all domains)
UniProt: P04695 (all domains)
Gene: GNAT1

Molecule: TRANSDUCIN

3D Structure

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Related Domains

Browse other domains in G-alpha →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyG-alpha(2004.1.1.47)

Ligands

in contact, ≤ 4 Å

5'-Guanosine-Diphosphate-MonothiophosphateGSP
drugDrugBank DB01864
Magnesium ionMG
metal

+ 1 additive (Cacodylate ion)

Pfam Families

PF00503G-alpha

G-protein alpha subunit

ClanCL0023P-loop_NTPase

External Links

ECOD PDB View: 1TND RCSB PDB: 1TND PDBe: 1TND UniProt: P04695

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Cacodylate ionCAC

Shown in the structure viewer. Drug annotations from DrugDomain.