ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4jnkC2 - ECOD Domain | ECOD

ECOD/Domains/e4jnkC2

e4jnkC2

UID: 001015633

PDB

Range: C:1-153
PDB: 4JNK chain C(all domains)
UniProt: P00338 (all domains)
Gene: LDHA

Molecule: L-lactate dehydrogenase A chain

3D Structure

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Related Domains

Browse other domains in Ldh_1_N →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupNAD(P)-binding Rossmann-fold domains(2003.1.1)

FFamilyLdh_1_N(2003.1.1.2)

Ligands

in contact, ≤ 4 Å

NADHNAI
drugDrugBank DB00157
(2R)-2-{[5-cyano-4-(3,4-dichlorophenyl)-6-oxo-1,6-dihydropyrimidin-2-yl]sulfanyl}-N-(4-sulfamoylphenyl)propanamideZHK

+ 1 additive (HEPES)

Pfam Families

PF00056Ldh_1_N

lactate/malate dehydrogenase, NAD binding domain

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 4JNK RCSB PDB: 4JNK PDBe: 4JNK UniProt: P00338

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

HEPESEPE

DrugBank DB16872

Shown in the structure viewer. Drug annotations from DrugDomain.