ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1tkjA1 - ECOD Domain | ECOD

ECOD/Domains/e1tkjA1

e1tkjA1

UID: 000010159

RepresentativePDB

Range: A:1-277
PDB: 1TKJ chain A(all domains)
UniProt: P80561 (all domains)
Gene: SGR_5809

Molecule: Aminopeptidase

3D Structure

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Related Domains

Browse other domains in Peptidase_M28 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPhosphorylase/hydrolase-like(2011)

HH-groupZn-dependent exopeptidases(2011.1)

TT-groupZn-dependent exopeptidases(2011.1.1)

FFamilyPeptidase_M28(2011.1.1.8)

Ligands

in contact, ≤ 4 Å

D-MethionineMED
drugDrugBank DB02893
Calcium ionCA
metal
Zinc ionZN

Pfam Families

PF04389Peptidase_M28

Peptidase family M28

ClanCL0865ZnExoPePases

External Links

ECOD PDB View: 1TKJ RCSB PDB: 1TKJ PDBe: 1TKJ UniProt: P80561

Downloads

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metal

Shown in the structure viewer. Drug annotations from DrugDomain.