ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4hmkB1 - ECOD Domain | ECOD

ECOD/Domains/e4hmkB1

e4hmkB1

UID: 001015999

PDB

Range: B:2-506
PDB: 4HMK chain B(all domains)
UniProt: O67854 (all domains)
Gene: snf

Molecule: Transporter

3D Structure

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Related Domains

Browse other domains in SNF →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupSodium:neurotransmitter symporter family (SNF)-like(5051)

HH-groupSodium:neurotransmitter symporter family (SNF)-like(5051.1)

TT-groupSodium:neurotransmitter symporter family (SNF)-like(5051.1.1)

FFamilySNF(5051.1.1.1)

Ligands

in contact, ≤ 4 Å

LeucineLEU
drugDrugBank DB00149
Bromide ionBR
Sodium ionNA
metal

Pfam Families

Sodium:neurotransmitter symporter family

ClanCL0062APC

External Links

ECOD PDB View: 4HMK RCSB PDB: 4HMK PDBe: 4HMK UniProt: O67854

Downloads

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+ 1 additive (octyl beta-D-glucopyranoside)

octyl beta-D-glucopyranosideBOG

Shown in the structure viewer. Drug annotations from DrugDomain.