ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3vu2B3 - ECOD Domain | ECOD

ECOD/Domains/e3vu2B3

e3vu2B3

UID: 001016148

PDB

Range: B:155-571
PDB: 3VU2 chain B(all domains)
UniProt: Q01401 (all domains)
Gene: SBE1

Molecule: 1,4-alpha-glucan-branching enzyme, chloroplastic/amyloplastic

3D Structure

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Related Domains

Browse other domains in Alpha-amylase →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyAlpha-amylase(2002.1.1.4)

Ligands

in contact, ≤ 4 Å

Beta-D-GlucoseBGC
drugDrugBank DB02379

+ 1 additive (Glycerol)

GlycerolGOL

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00128Alpha-amylase

Alpha amylase, catalytic domain

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 3VU2 RCSB PDB: 3VU2 PDBe: 3VU2 UniProt: Q01401

Downloads

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