ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3w5eB1 - ECOD Domain | ECOD

ECOD/Domains/e3w5eB1

e3w5eB1

UID: 001016220

PDB

Range: B:152-496
PDB: 3W5E chain B(all domains)
UniProt: Q07343 (all domains)
Gene: PDE4B

Molecule: cAMP-specific 3',5'-cyclic phosphodiesterase 4B

3D Structure

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Related Domains

Browse other domains in PDEase_I →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupPDEase-like(131)

HH-groupHD-domain/PDEase-like(131.1)

TT-groupHD-domain/PDEase-like(131.1.1)

FFamilyPDEase_I(131.1.1.1)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal
N-tert-butyl-2-{4-[(5,5-dioxido-2-phenyl-7,8-dihydro-6H-thiopyrano[3,2-d]pyrimidin-4-yl)amino]phenyl}acetamideNVW
Zinc ionZN

Pfam Families

PF00233PDEase_I

3'5'-cyclic nucleotide phosphodiesterase

ClanCL0237HD_PDEase

External Links

ECOD PDB View: 3W5E RCSB PDB: 3W5E PDBe: 3W5E UniProt: Q07343

Downloads

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metal

Shown in the structure viewer. Drug annotations from DrugDomain.