ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4jn6A1 - ECOD Domain | ECOD

ECOD/Domains/e4jn6A1

e4jn6A1

UID: 001016222

PDB

Range: A:286-338
PDB: 4JN6 chain A(all domains)
UniProt: P9WMK5 (all domains)
Gene: hsaF

Molecule: 4-hydroxy-2-oxovalerate aldolase

3D Structure

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Related Domains

Browse other domains in DmpG_comm →

Classification

AArchitecturealpha arrays(a.6)

XX-groupRuvA-C(103)

HH-grouppost-HMGL domain-like(103.5)

TT-grouppost-HMGL domain-like(103.5.1)

FFamilyDmpG_comm(103.5.1.2)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Oxalate ion)

Oxalate ionOXL

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF07836DmpG_comm

DmpG-like communication domain

ClanCL0597Post-HMGL

External Links

ECOD PDB View: 4JN6 RCSB PDB: 4JN6 PDBe: 4JN6 UniProt: P9WMK5

Downloads

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