ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4jn6A2 - ECOD Domain | ECOD

ECOD/Domains/e4jn6A2

e4jn6A2

UID: 001016223

PDB

Range: A:1-285
PDB: 4JN6 chain A(all domains)
UniProt: P9WMK5 (all domains)
Gene: hsaF

Molecule: 4-hydroxy-2-oxovalerate aldolase

3D Structure

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Related Domains

Browse other domains in HMGL-like →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyHMGL-like(2002.1.1.25)

Ligands

in contact, ≤ 4 Å

MANGANESE (II) IONMN
metal

+ 1 additive (Oxalate ion)

Oxalate ionOXL

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00682HMGL-like

HMGL-like

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 4JN6 RCSB PDB: 4JN6 PDBe: 4JN6 UniProt: P9WMK5

Downloads

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