ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1lnzB2 - ECOD Domain | ECOD

ECOD/Domains/e1lnzB2

e1lnzB2

UID: 000101651

PDB

Range: B:158-337
PDB: 1LNZ chain B(all domains)
UniProt: P20964 (all domains)
Gene: obg

Molecule: SPO0B-associated GTP-binding protein

3D Structure

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Related Domains

Browse other domains in MMR_HSR1 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyMMR_HSR1(2004.1.1.73)

Ligands

in contact, ≤ 4 Å

Guanosine tetraphosphateG4P
drugDrugBank DB04022
Magnesium ionMG
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01926MMR_HSR1

50S ribosome-binding GTPase

ClanCL0023P-loop_NTPase

External Links

ECOD PDB View: 1LNZ RCSB PDB: 1LNZ PDBe: 1LNZ UniProt: P20964

Downloads

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