ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2rijA1 - ECOD Domain | ECOD

ECOD/Domains/e2rijA1

e2rijA1

UID: 001016677

PDB

Range: A:205-380
PDB: 2RIJ chain A(all domains)
UniProt: Q0P823 (all domains)
Gene: dapD

Molecule: Putative 2,3,4,5-tetrahydropyridine-2-carboxylate N- succinyltransferase

3D Structure

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Related Domains

Browse other domains in Hexapep_2 →

Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupSingle-stranded left-handed beta-helix(208)

HH-groupTrimeric LpxA-like enzymes(208.1)

TT-groupTrimeric LpxA-like enzymes(208.1.1)

FFamilyHexapep_2(208.1.1.6)

Ligands

in contact, ≤ 4 Å

Chloride ionCL

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF14602Hexapep_2

Hexapeptide repeat of succinyl-transferase

ClanCL0536HEXAPEP

External Links

ECOD PDB View: 2RIJ RCSB PDB: 2RIJ PDBe: 2RIJ UniProt: Q0P823

Downloads

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