ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1xovA2 - ECOD Domain | ECOD

ECOD/Domains/e1xovA2

e1xovA2

UID: 000010179

RepresentativePDB

Range: A:1-180
PDB: 1XOV chain A(all domains)
UniProt: Q8W5Y8 (all domains)
Gene: ply

Molecule: Ply protein

3D Structure

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Related Domains

Browse other domains in Amidase_3 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupPhosphorylase/hydrolase-like(2011)

HH-groupZn-dependent exopeptidases(2011.1)

TT-groupZn-dependent exopeptidases(2011.1.1)

FFamilyAmidase_3(2011.1.1.5)

Ligands

in contact, ≤ 4 Å

Glutamic acidGLU
drugDrugBank DB00142
LysineLYS
drugDrugBank DB00123
Zinc ion

Pfam Families

PF01520Amidase_3

N-acetylmuramoyl-L-alanine amidase

ClanCL0865ZnExoPePases

External Links

ECOD PDB View: 1XOV RCSB PDB: 1XOV PDBe: 1XOV UniProt: Q8W5Y8

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

metal

+ 1 additive (Tromethamine)

TromethamineTRS
DrugBank DB03754

Shown in the structure viewer. Drug annotations from DrugDomain.