ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4kx3A1 - ECOD Domain | ECOD

ECOD/Domains/e4kx3A1

e4kx3A1

UID: 001018910

PDB

Range: A:7-297
PDB: 4KX3 chain A(all domains)
UniProt: Q9D020 (all domains)
Gene: Nt5c3a

Molecule: Isoform 1 of Cytosolic 5'-nucleotidase 3A

3D Structure

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Related Domains

Browse other domains in UMPH-1 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupHAD domain-like(2006)

HH-groupHAD domain-related(2006.1)

TT-groupHAD-like(2006.1.1)

FFamilyUMPH-1(2006.1.1.9)

Ligands

in contact, ≤ 4 Å

Thymidine monophosphateTMP
drugDrugBank DB01643within 5 Å only
Magnesium ionMG
metal

+ 2 additives (HEPES, 1,2-ETHANEDIOL)

Pfam Families

Pyrimidine 5'-nucleotidase (UMPH-1)

ClanCL0137HAD

External Links

ECOD PDB View: 4KX3 RCSB PDB: 4KX3 PDBe: 4KX3 UniProt: Q9D020

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

HEPESEPE
DrugBank DB16872
1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.