ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1xocA2 - ECOD Domain | ECOD

ECOD/Domains/e1xocA2

e1xocA2

UID: 001019378

RepresentativePDB

Range: A:55-157
PDB: 1XOC chain A(all domains)
UniProt: P42061 (all domains)
Gene: appA

Molecule: Oligopeptide-binding protein appA

3D Structure

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Related Domains

Browse other domains in SBP_bac_5 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupOligo-peptide binding protein (OPPA) insertion domain(304.136)

TT-groupOligo-peptide binding protein (OPPA) insertion domain(304.136.1)

FFamilySBP_bac_5(304.136.1.1)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00496SBP_bac_5

Bacterial extracellular solute-binding proteins, family 5 Middle

ClanCL0177PBP

External Links

ECOD PDB View: 1XOC RCSB PDB: 1XOC PDBe: 1XOC UniProt: P42061

Downloads

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