ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e2j7pB2 - ECOD Domain | ECOD

ECOD/Domains/e2j7pB2

e2j7pB2

UID: 000102059

PDB

Range: B:89-294
PDB: 2J7P chain B(all domains)
UniProt: O07347 (all domains)
Gene: ffh

Molecule: SIGNAL RECOGNITION PARTICLE PROTEIN

3D Structure

Loading viewer...

Related Domains

Browse other domains in SRP54 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilySRP54(2004.1.1.43)

Ligands

in contact, ≤ 4 Å

Phosphoaminophosphonic acid guanylate esterGNP
drugDrugBank DB02082
Iodide ionIOD
Magnesium ionMG

Pfam Families

SRP54-type protein, GTPase domain

ClanCL0023P-loop_NTPase

External Links

ECOD PDB View: 2J7P RCSB PDB: 2J7P PDBe: 2J7P UniProt: O07347

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

metal

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.