ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1vmaB2 - ECOD Domain | ECOD

ECOD/Domains/e1vmaB2

e1vmaB2

UID: 000102091

PDB

Range: B:84-294
PDB: 1VMA chain B(all domains)
UniProt: Q9WZ40 (all domains)
Gene: ftsY

Molecule: cell division protein FtsY

3D Structure

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Related Domains

Browse other domains in SRP54 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilySRP54(2004.1.1.43)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Citric acid)

Citric acidCIT
DrugBank DB04272

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

SRP54-type protein, GTPase domain

ClanCL0023P-loop_NTPase

External Links

ECOD PDB View: 1VMA RCSB PDB: 1VMA PDBe: 1VMA UniProt: Q9WZ40

Downloads

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