ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1pznG1 - ECOD Domain | ECOD

ECOD/Domains/e1pznG1

e1pznG1

UID: 000102252

PDB

Range: G:109-349
PDB: 1PZN chain G(all domains)
UniProt: O74036 (all domains)
Gene: radA

Molecule: DNA repair and recombination protein rad51

3D Structure

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Related Domains

Browse other domains in Rad51 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyRad51(2004.1.1.162)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 3 additives (Glycerin, (4r)-2-Methylpentane-2,4-Diol, Sulfate ion)

GlycerinGOL
DrugBank DB09462
(4r)-2-Methylpentane-2,4-DiolMPD
DrugBank DB03564
Sulfate ion

Pfam Families

Rad51

ClanCL0023P-loop_NTPase

External Links

ECOD PDB View: 1PZN RCSB PDB: 1PZN PDBe: 1PZN UniProt: O74036

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.