ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e1bmfD2 - ECOD Domain | ECOD

ECOD/Domains/e1bmfD2

e1bmfD2

UID: 000102335

PDB

Range: D:82-357
PDB: 1BMF chain D(all domains)
UniProt: P00829 (all domains)
Gene: ATP5F1B

Molecule: BOVINE MITOCHONDRIAL F1-ATPASE

3D Structure

Loading viewer...

Related Domains

Browse other domains in ATP-synt_ab →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyATP-synt_ab(2004.1.1.10)

Ligands

in contact, ≤ 4 Å

Adenosine disphosphateADP
drugDrugBank DB16833
Magnesium ionMG
metal
Phosphoaminophosphonic acid-adenylate ester

Pfam Families

PF00006ATP-synt_ab

ATP synthase alpha/beta family, nucleotide-binding domain

ClanCL0023P-loop_NTPase

External Links

ECOD PDB View: 1BMF RCSB PDB: 1BMF PDBe: 1BMF UniProt: P00829

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.