ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1c9kB1 - ECOD Domain | ECOD

ECOD/Domains/e1c9kB1

e1c9kB1

UID: 000102374

PDB

Range: B:1-180
PDB: 1C9K chain B(all domains)
UniProt: Q05599 (all domains)
Gene: cobU

Molecule: ADENOSYLCOBINAMIDE KINASE

3D Structure

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Related Domains

Browse other domains in CobU →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyCobU(2004.1.1.83)

Ligands

in contact, ≤ 4 Å

Guanosine-5'-Monophosphate5GP
drugDrugBank DB01972
PYROPHOSPHATE 2-POP
within 5 Å only

+ 1 additive (Phosphate ion)

Pfam Families

Cobinamide kinase / cobinamide phosphate guanyltransferase

ClanCL0023P-loop_NTPase

External Links

ECOD PDB View: 1C9K RCSB PDB: 1C9K PDBe: 1C9K UniProt: Q05599

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Phosphate ionPO4

DrugBank DB14523

Shown in the structure viewer. Drug annotations from DrugDomain.