ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2j0qB1 - ECOD Domain | ECOD

ECOD/Domains/e2j0qB1

e2j0qB1

UID: 000102629

PDB

Range: B:251-411
PDB: 2J0Q chain B(all domains)
UniProt: P38919 (all domains)
Gene: EIF4A3

Molecule: ATP-DEPENDENT RNA HELICASE DDX48

3D Structure

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Related Domains

Browse other domains in Helicase_C →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyHelicase_C(2004.1.1.30)

Ligands

in contact, ≤ 4 Å

Phosphoaminophosphonic acid-adenylate esterANP
Magnesium ionMG
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00271Helicase_C

Helicase conserved C-terminal domain

ClanCL0023P-loop_NTPase

External Links

ECOD PDB View: 2J0Q RCSB PDB: 2J0Q PDBe: 2J0Q UniProt: P38919

Downloads

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