ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e1xtiA1 - ECOD Domain | ECOD

ECOD/Domains/e1xtiA1

e1xtiA1

UID: 000102671

PDB

Range: A:46-251
PDB: 1XTI chain A(all domains)
UniProt: Q13838 (all domains)
Gene: DDX39B

Molecule: Probable ATP-dependent RNA helicase p47

3D Structure

Loading viewer...

Related Domains

Browse other domains in DEAD →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyDEAD(2004.1.1.29)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Isopropyl alcohol)

Isopropyl alcoholIPA
DrugBank DB02325

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

DEAD/DEAH box helicase

ClanCL0023P-loop_NTPase

External Links

ECOD PDB View: 1XTI RCSB PDB: 1XTI PDBe: 1XTI UniProt: Q13838

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure