ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1t6nB1 - ECOD Domain | ECOD

ECOD/Domains/e1t6nB1

e1t6nB1

UID: 000102672

PDB

Range: B:45-251
PDB: 1T6N chain B(all domains)
UniProt: Q13838 (all domains)
Gene: DDX39B

Molecule: Probable ATP-dependent RNA helicase

3D Structure

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Related Domains

Browse other domains in DEAD →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyDEAD(2004.1.1.29)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Citrate anion)

Citrate anionFLC

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

DEAD/DEAH box helicase

ClanCL0023P-loop_NTPase

External Links

ECOD PDB View: 1T6N RCSB PDB: 1T6N PDBe: 1T6N UniProt: Q13838

Downloads

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