ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2b8tD2 - ECOD Domain | ECOD

ECOD/Domains/e2b8tD2

e2b8tD2

UID: 000102880

PDB

Range: D:12-149
PDB: 2B8T chain D(all domains)
UniProt: Q9PPP5 (all domains)
Gene: tdk

Molecule: Thymidine kinase

3D Structure

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Related Domains

Browse other domains in TK →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyTK(2004.1.1.28)

Ligands

in contact, ≤ 4 Å

ThymidineTHM
drugDrugBank DB04485

+ 1 additive (Tromethamine)

TromethamineTRS
DrugBank DB03754

Shown in the structure viewer.

Pfam Families

Thymidine kinase

ClanCL0023P-loop_NTPase

External Links

ECOD PDB View: 2B8T RCSB PDB: 2B8T PDBe: 2B8T UniProt: Q9PPP5

Downloads

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Drug annotations from DrugDomain.