ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1w55A2 - ECOD Domain | ECOD

ECOD/Domains/e1w55A2

e1w55A2

UID: 000010298

RepresentativePDB

Range: A:3-207
PDB: 1W55 chain A(all domains)
UniProt: Q9PM68 (all domains)
Gene: ispDF

Molecule: ISPD/ISPF BIFUNCTIONAL ENZYME

3D Structure

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Related Domains

Browse other domains in IspD →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupNucleotide-diphospho-sugar transferases(7516)

HH-groupNucleotide-diphospho-sugar transferases(7516.1)

TT-groupNucleotide-diphospho-sugar transferases(7516.1.1)

FFamilyIspD(7516.1.1.5)

Ligands

in contact, ≤ 4 Å

Cytidine-5'-MonophosphateC
drugDrugBank DB03403within 5 Å only

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase

ClanCL0110GT-A

External Links

ECOD PDB View: 1W55 RCSB PDB: 1W55 PDBe: 1W55 UniProt: Q9PM68

Downloads

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