ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2jfhA2 - ECOD Domain | ECOD

ECOD/Domains/e2jfhA2

e2jfhA2

UID: 000103003

PDB

Range: A:94-297
PDB: 2JFH chain A(all domains)
UniProt: P14900 (all domains)
Gene: murD

Molecule: UDP-N-ACETYLMURAMOYL-ALANINE-D-GLUTAMATE LIGASE

3D Structure

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Related Domains

Browse other domains in Mur_ligase_M →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyMur_ligase_M(2004.1.1.159)

Ligands

in contact, ≤ 4 Å

N-[(6-butoxynaphthalen-2-yl)sulfonyl]-L-glutamic acidLK1
drugDrugBank DB08105

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Pfam Families

PF08245Mur_ligase_M

Mur ligase middle domain

ClanCL0023P-loop_NTPase

External Links

ECOD PDB View: 2JFH RCSB PDB: 2JFH PDBe: 2JFH UniProt: P14900

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.