ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3w1vA1 - ECOD Domain | ECOD

ECOD/Domains/e3w1vA1

e3w1vA1

UID: 001030298

PDB

Range: A:2-338
PDB: 3W1V chain A(all domains)
UniProt: Q7A2Y4 (all domains)

Molecule: Capsular polysaccharide synthesis enzyme Cap8E

3D Structure

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Related Domains

Browse other domains in Polysacc_synt_2 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupNAD(P)-binding Rossmann-fold domains(2003.1.1)

FFamilyPolysacc_synt_2(2003.1.1.34)

Ligands

in contact, ≤ 4 Å

Sodium ionNA
metal
[(2R,3S,4R,5R,6R)-5-acetamido-6-[[[(2R,3S,4R,5R)-5-[2,4-bis(oxidanylidene)pyrimidin-1-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl]oxy-oxidanyl-phosphoryl]oxy-3,4-bis(oxidanyl)oxan-2-yl]methylimino-azanylidene-azaniumUDZ

+ 2 additives (HEPES, Sulfate ion)

HEPES

Pfam Families

PF02719Polysacc_synt_2

Polysaccharide biosynthesis protein

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 3W1V RCSB PDB: 3W1V PDBe: 3W1V UniProt: Q7A2Y4

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB16872

Sulfate ionSO4

DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.