ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4bkpB1 - ECOD Domain | ECOD

ECOD/Domains/e4bkpB1

e4bkpB1

UID: 001030380

PDB

Range: B:8-320
PDB: 4BKP chain B(all domains)
UniProt: Q13630 (all domains)
Gene: GFUS

Molecule: GDP-L-FUCOSE SYNTHASE

3D Structure

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Related Domains

Browse other domains in Epimerase, RmlD_sub_bind →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupNAD(P)-binding Rossmann-fold domains(2003.1.1)

FFamilyEpimerase, RmlD_sub_bind(2003.1.1.150)

Ligands

in contact, ≤ 4 Å

Nicotinamide adenine dinucleotide phosphateNAP
drugDrugBank DB03461

+ 1 additive (Citrate anion)

Citrate anionFLC

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01370Epimerase

NAD dependent epimerase/dehydratase family

ClanCL0063NADP_Rossmann

PF04321RmlD_sub_bind

RmlD substrate binding domain

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 4BKP RCSB PDB: 4BKP PDBe: 4BKP UniProt: Q13630

Downloads

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