ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4gaaB3 - ECOD Domain | ECOD

ECOD/Domains/e4gaaB3

e4gaaB3

UID: 001030486

PDB

Range: B:206-457
PDB: 4GAA chain B(all domains)
UniProt: Q6IP81 (all domains)
Gene: lta4h.L

Molecule: MGC78867 protein

3D Structure

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Related Domains

Browse other domains in Peptidase_M1 →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupZincin-like(2498)

HH-groupMetalloproteases ("zincins") catalytic domain(2498.1)

TT-groupMetalloproteases ("zincins") catalytic domain(2498.1.1)

FFamilyPeptidase_M1(2498.1.1.9)

Ligands

in contact, ≤ 4 Å

UbenimexBES
drugDrugBank DB03424
Zinc ionZN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01433Peptidase_M1

Peptidase family M1 domain

ClanCL0126Peptidase_MA

External Links

ECOD PDB View: 4GAA RCSB PDB: 4GAA PDBe: 4GAA UniProt: Q6IP81

Downloads

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