ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4l2mB1 - ECOD Domain | ECOD

ECOD/Domains/e4l2mB1

e4l2mB1

UID: 001030848

PDB

Range: B:2-124
PDB: 4L2M chain B(all domains)
UniProt: Q8RT58 (all domains)
Gene: glbN

Molecule: Cyanoglobin

3D Structure

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Related Domains

Browse other domains in Bac_globin →

Classification

AArchitecturealpha arrays(a.6)

XX-groupGlobin-like(106)

HH-groupGlobin-like(106.1)

TT-groupGlobin-like(106.1.1)

FFamilyBac_globin(106.1.1.3)

Ligands

in contact, ≤ 4 Å

Hybrid Between B and C Type Hemes (Protoporphyrin Ixcontaining Fe)HEB
drugDrugBank DB02182
Cyanide ionCYN

+ 1 additive (Sulfate ion)

Sulfate ion

Pfam Families

PF01152Bac_globin

Bacterial-like globin

ClanCL0090Globin

External Links

ECOD PDB View: 4L2M RCSB PDB: 4L2M PDBe: 4L2M UniProt: Q8RT58

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.