ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1xmxA3 - ECOD Domain | ECOD

ECOD/Domains/e1xmxA3

e1xmxA3

UID: 001030945

RepresentativePDB

Range: A:248-383
PDB: 1XMX chain A(all domains)
UniProt: Q9KQU9 (all domains)
Gene: VC_1899

Molecule: hypothetical protein VC1899

3D Structure

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Related Domains

Browse other domains in Card1_endonuc →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRestriction endonuclease-like(2008)

HH-groupRestriction endonuclease-like(2008.1)

TT-groupRestriction endonuclease-like(2008.1.1)

FFamilyCard1_endonuc(2008.1.1.34)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Formic acid)

Formic acidFMT
DrugBank DB01942

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF09002Card1_endonuc

Card1-like, endonuclease domain

ClanCL0236PDDEXK

External Links

ECOD PDB View: 1XMX RCSB PDB: 1XMX PDBe: 1XMX UniProt: Q9KQU9

Downloads

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