ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e3f7tA3 - ECOD Domain | ECOD

ECOD/Domains/e3f7tA3

e3f7tA3

UID: 001031061

RepresentativePDB

Range: A:196-310
PDB: 3F7T chain A(all domains)
UniProt: P62623 (all domains)
Gene: ispH

Molecule: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase

3D Structure

Loading viewer...

Related Domains

Browse other domains in LYTB →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupNadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase(7588)

HH-groupNadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase(7588.1)

TT-groupNadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase(7588.1.1)

FFamilyLYTB(7588.1.1.1)

Ligands

in contact, ≤ 4 Å

FE3-S4 CLUSTERF3S
PYROPHOSPHATE 2-POP

+ 1 additive (Phosphate ion)

Phosphate ionPO4

Pfam Families

LytB protein

External Links

ECOD PDB View: 3F7T RCSB PDB: 3F7T PDBe: 3F7T UniProt: P62623

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB14523

Shown in the structure viewer. Drug annotations from DrugDomain.