ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4igbA1 - ECOD Domain | ECOD

ECOD/Domains/e4igbA1

e4igbA1

UID: 001031146

RepresentativePDB

Range: A:36-311
PDB: 4IGB chain A(all domains)
UniProt: A8AW49 (all domains)
Gene: SGO_0707

Molecule: LPXTG cell wall surface protein

3D Structure

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Related Domains

Browse other domains in Sgo0707_N1 →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupGlycosyl hydrolase domain-like(12)

HH-groupV-region of surface antigen I/II (SA I/II, PAC)(12.4)

TT-groupV-region of surface antigen I/II (SA I/II, PAC)(12.4.1)

FFamilySgo0707_N1(12.4.1.3)

Ligands

in contact, ≤ 4 Å

Sodium ionNA
metal

+ 3 additives (Acetate, Glycerin, Sulfate ion)

AcetateACT
DrugBank DB14511
GlycerinGOL

Pfam Families

PF18873Sgo0707_N1

Sgo0707 N-terminal domain

External Links

ECOD PDB View: 4IGB RCSB PDB: 4IGB PDBe: 4IGB UniProt: A8AW49

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB09462

Sulfate ionSO4

DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.