ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e3kp0A2 - ECOD Domain | ECOD

ECOD/Domains/e3kp0A2

e3kp0A2

UID: 001033583

PDB

Range: A:5-506
PDB: 3KP0 chain A(all domains)
UniProt: E3PY95 (all domains)
Gene: oraE

Molecule: D-ornithine aminomutase E component

3D Structure

Loading viewer...

Related Domains

Browse other domains in Lys-AminoMut_A →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyLys-AminoMut_A(2002.1.1.158)

Ligands

in contact, ≤ 4 Å

5'-DEOXYADENOSINE5AD
CobalaminB12
(2S)-2-amino-4-{[(1Z)-{3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methylidene]amino}butanoic acidZ98

Pfam Families

PF09043Lys-AminoMut_A

D-Lysine 5,6-aminomutase TIM-barrel domain of alpha subunit

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 3KP0 RCSB PDB: 3KP0 PDBe: 3KP0 UniProt: E3PY95

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Shown in the structure viewer. Drug annotations from DrugDomain.