ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3zgnB1 - ECOD Domain | ECOD

ECOD/Domains/e3zgnB1

e3zgnB1

UID: 001036946

PDB

Range: B:1-95
PDB: 3ZGN chain B(all domains)
UniProt: P62623 (all domains)
Gene: ispH

Molecule: 4-HYDROXY-3-METHYLBUT-2-ENYL DIPHOSPHATE REDUCTASE

3D Structure

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Related Domains

Browse other domains in LYTB →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupNadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase(7588)

HH-groupNadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase(7588.1)

TT-groupNadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase(7588.1.1)

FFamilyLYTB(7588.1.1.1)

Ligands

in contact, ≤ 4 Å

(2E)-3-methyl-4-sulfanylbut-2-en-1-yl trihydrogen diphosphate10G
Iron/sulfur clusterSF4

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

LytB protein

External Links

ECOD PDB View: 3ZGN RCSB PDB: 3ZGN PDBe: 3ZGN UniProt: P62623

Downloads

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