ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1d3yB3 - ECOD Domain | ECOD

ECOD/Domains/e1d3yB3

e1d3yB3

UID: 000103753

PDB

Range: B:189-368
PDB: 1D3Y chain B(all domains)
UniProt: Q57815 (all domains)
Gene: top6A

Molecule: DNA TOPOISOMERASE VI A SUBUNIT

3D Structure

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Related Domains

Browse other domains in TOP6A-Spo11_Toprim →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupHAD domain-like(2006)

HH-groupHAD domain-related(2006.1)

TT-groupToprim domain(2006.1.3)

FFamilyTOP6A-Spo11_Toprim(2006.1.3.11)

Ligands

in contact, ≤ 4 Å

Magnesium ionMG
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF21180TOP6A-Spo11_Toprim

Topoisomerase 6 subunit A/Spo11, Toprim domain

ClanCL0413Toprim-like

External Links

ECOD PDB View: 1D3Y RCSB PDB: 1D3Y PDBe: 1D3Y UniProt: Q57815

Downloads

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